Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 HAUS4P1-201ENST00000406739 1145 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 RBPMS2P1-201ENST00000437762 623 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 DNAJB3-202ENST00000449667 1266 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 ALG1L8P-201ENST00000533887 760 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AC009093.7-201ENST00000623853 1223 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 FOXO1B-201ENST00000504678 1527 ntBASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM53Q6P2H8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms