Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 HLA-K-203ENST00000430151 1046 ntBASIC16.21■□□□□ 0.19
VARS2Q5ST30 HOMER2P2-201ENST00000451621 847 ntBASIC16.21■□□□□ 0.19
VARS2Q5ST30 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 RN7SL371P-201ENST00000578099 267 ntBASIC16.21■□□□□ 0.19
VARS2Q5ST30 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 REXO1L5P-201ENST00000622260 2098 ntBASIC16.21■□□□□ 0.19
VARS2Q5ST30 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARS2Q5ST30 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
VARS2Q5ST30 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VARS2Q5ST30 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VARS2Q5ST30 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.21■□□□□ 0.18
VARS2Q5ST30 AC008741.2-201ENST00000612792 3115 ntBASIC16.21■□□□□ 0.18
VARS2Q5ST30 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VARS2Q5ST30 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VARS2Q5ST30 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
VARS2Q5ST30 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
VARS2Q5ST30 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
VARS2Q5ST30 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 POM121L8P-201ENST00000417732 1281 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 POM121L9P-203ENST00000441984 1285 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 CNN2P10-201ENST00000443067 918 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 C2orf69P2-201ENST00000562032 1123 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 AP006547.1-201ENST00000563435 692 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 AC243960.2-201ENST00000600996 747 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.2■□□□□ 0.18
VARS2Q5ST30 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARS2Q5ST30 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VARS2Q5ST30 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VARS2Q5ST30 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARS2Q5ST30 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms