Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 MESTP3-201ENST00000503460 968 ntBASIC21.01■□□□□ 0.95
CDCA8Q53HL2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.01■□□□□ 0.95
CDCA8Q53HL2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDCA8Q53HL2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC21■□□□□ 0.95
CDCA8Q53HL2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDCA8Q53HL2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21■□□□□ 0.95
CDCA8Q53HL2 FTLP10-202ENST00000505798 471 ntBASIC21■□□□□ 0.95
CDCA8Q53HL2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21■□□□□ 0.95
CDCA8Q53HL2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CDCA8Q53HL2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21■□□□□ 0.95
CDCA8Q53HL2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 AL359258.3-201ENST00000622910 2331 ntBASIC21■□□□□ 0.95
CDCA8Q53HL2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 AC132872.4-202ENST00000622924 2756 ntBASIC21■□□□□ 0.95
CDCA8Q53HL2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDCA8Q53HL2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDCA8Q53HL2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 AL354989.2-201ENST00000435838 1540 ntBASIC20.99■□□□□ 0.95
CDCA8Q53HL2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 MIR1202-201ENST00000408529 83 ntBASIC20.99■□□□□ 0.95
CDCA8Q53HL2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 FAM8A4P-201ENST00000435433 1213 ntBASIC20.99■□□□□ 0.95
CDCA8Q53HL2 AL583810.1-201ENST00000553344 1045 ntBASIC20.99■□□□□ 0.95
CDCA8Q53HL2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 AC138466.3-201ENST00000619983 221 ntBASIC20.99■□□□□ 0.95
CDCA8Q53HL2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA8Q53HL2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 REXO1L2P-201ENST00000425429 2069 ntBASIC20.98■□□□□ 0.95
CDCA8Q53HL2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 TUBB1P2-201ENST00000422712 1306 ntBASIC20.98■□□□□ 0.95
CDCA8Q53HL2 CLUHP2-201ENST00000426660 1303 ntBASIC20.98■□□□□ 0.95
CDCA8Q53HL2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 TUBB1P1-201ENST00000503144 1300 ntBASIC20.98■□□□□ 0.95
CDCA8Q53HL2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA8Q53HL2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.97■□□□□ 0.95
CDCA8Q53HL2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA8Q53HL2 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.97■□□□□ 0.95
CDCA8Q53HL2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms