Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 KRT18P27-201ENST00000427733 1299 ntBASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AL645728.2-201ENST00000641974 660 ntBASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AL136982.4-201ENST00000437689 1740 ntBASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC6LQ2NKX8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 LAGE3P1-201ENST00000425356 484 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AC061975.2-201ENST00000581722 295 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 LINC01711-201ENST00000598340 967 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AL732292.2-201ENST00000609649 430 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AL355877.3-201ENST00000622820 899 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AC015818.8-201ENST00000587907 1519 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AL591122.2-201ENST00000624125 1853 ntBASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC6LQ2NKX8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.28■□□□□ 0.2
ERCC6LQ2NKX8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms