Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 BTNL10-201ENST00000595971 695 ntBASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC233724.13-201ENST00000598383 410 ntBASIC19.85■□□□□ 0.77
CCDC27Q2M243 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 RN7SL48P-201ENST00000579283 293 ntBASIC19.84■□□□□ 0.77
CCDC27Q2M243 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.84■□□□□ 0.77
CCDC27Q2M243 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 LRRC59-203ENST00000576448 1531 ntBASIC19.84■□□□□ 0.77
CCDC27Q2M243 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.84■□□□□ 0.77
CCDC27Q2M243 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC27Q2M243 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
CCDC27Q2M243 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 AC103702.1-201ENST00000548801 2630 ntBASIC19.83■□□□□ 0.77
CCDC27Q2M243 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 AC106886.1-201ENST00000568660 600 ntBASIC19.83■□□□□ 0.77
CCDC27Q2M243 AC025279.2-201ENST00000569730 653 ntBASIC19.83■□□□□ 0.77
CCDC27Q2M243 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC27Q2M243 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC27Q2M243 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.83■□□□□ 0.77
CCDC27Q2M243 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC27Q2M243 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC27Q2M243 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC27Q2M243 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC27Q2M243 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC27Q2M243 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC27Q2M243 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 POM121L8P-201ENST00000417732 1281 ntBASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 POM121L9P-203ENST00000441984 1285 ntBASIC19.82■□□□□ 0.76
CCDC27Q2M243 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms