Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 AL354989.2-201ENST00000435838 1540 ntBASIC17.9■□□□□ 0.46
IRX3P78415 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 RNU1-114P-201ENST00000365297 166 ntBASIC17.9■□□□□ 0.46
IRX3P78415 CD8B2-202ENST00000417670 633 ntBASIC17.9■□□□□ 0.46
IRX3P78415 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.9■□□□□ 0.46
IRX3P78415 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.9■□□□□ 0.46
IRX3P78415 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.9■□□□□ 0.46
IRX3P78415 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.9■□□□□ 0.46
IRX3P78415 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.9■□□□□ 0.46
IRX3P78415 ECM1P1-201ENST00000604092 1279 ntBASIC17.9■□□□□ 0.46
IRX3P78415 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 AC244452.3-201ENST00000636814 210 ntBASIC17.9■□□□□ 0.46
IRX3P78415 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.9■□□□□ 0.46
IRX3P78415 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.9■□□□□ 0.46
IRX3P78415 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
IRX3P78415 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
IRX3P78415 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
IRX3P78415 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
IRX3P78415 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 TPM3P8-201ENST00000330554 643 ntBASIC17.89■□□□□ 0.45
IRX3P78415 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.89■□□□□ 0.45
IRX3P78415 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 AC114812.1-204ENST00000449669 728 ntBASIC17.89■□□□□ 0.45
IRX3P78415 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 AC104982.3-201ENST00000581995 514 ntBASIC17.89■□□□□ 0.45
IRX3P78415 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IRX3P78415 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IRX3P78415 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.89■□□□□ 0.45
IRX3P78415 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.89■□□□□ 0.45
IRX3P78415 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.89■□□□□ 0.45
IRX3P78415 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.89■□□□□ 0.45
IRX3P78415 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 AC015818.8-201ENST00000587907 1519 ntBASIC17.88■□□□□ 0.45
IRX3P78415 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 AC007950.2-201ENST00000615045 2347 ntBASIC17.88■□□□□ 0.45
IRX3P78415 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 AC105917.1-201ENST00000506637 2539 ntBASIC17.88■□□□□ 0.45
IRX3P78415 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 SLC25A24P2-201ENST00000415059 510 ntBASIC17.88■□□□□ 0.45
IRX3P78415 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.88■□□□□ 0.45
IRX3P78415 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.88■□□□□ 0.45
IRX3P78415 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.88■□□□□ 0.45
IRX3P78415 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.88■□□□□ 0.45
IRX3P78415 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.88■□□□□ 0.45
IRX3P78415 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.88■□□□□ 0.45
IRX3P78415 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
IRX3P78415 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
IRX3P78415 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
IRX3P78415 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IRX3P78415 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms