Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.06■□□□□ 0.16
IRX4P78413 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
IRX4P78413 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.06■□□□□ 0.16
IRX4P78413 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 CROCCP4-201ENST00000457096 498 ntBASIC16.06■□□□□ 0.16
IRX4P78413 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.06■□□□□ 0.16
IRX4P78413 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
IRX4P78413 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.06■□□□□ 0.16
IRX4P78413 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 AC093726.1-201ENST00000608064 963 ntBASIC16.06■□□□□ 0.16
IRX4P78413 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 WFDC1-204ENST00000613603 549 ntBASIC16.06■□□□□ 0.16
IRX4P78413 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 AL109954.1-202ENST00000564051 2148 ntBASIC16.06■□□□□ 0.16
IRX4P78413 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.05■□□□□ 0.16
IRX4P78413 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
IRX4P78413 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 AC093724.1-201ENST00000448659 1027 ntBASIC16.05■□□□□ 0.16
IRX4P78413 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.05■□□□□ 0.16
IRX4P78413 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.05■□□□□ 0.16
IRX4P78413 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.05■□□□□ 0.16
IRX4P78413 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.05■□□□□ 0.16
IRX4P78413 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.05■□□□□ 0.16
IRX4P78413 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.05■□□□□ 0.16
IRX4P78413 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IRX4P78413 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IRX4P78413 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.04■□□□□ 0.16
IRX4P78413 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IRX4P78413 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IRX4P78413 AL009178.2-201ENST00000597278 2719 ntBASIC16.04■□□□□ 0.16
IRX4P78413 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IRX4P78413 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IRX4P78413 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IRX4P78413 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IRX4P78413 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.04■□□□□ 0.16
IRX4P78413 BNIP3P42-201ENST00000454982 569 ntBASIC16.04■□□□□ 0.16
IRX4P78413 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.04■□□□□ 0.16
IRX4P78413 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.04■□□□□ 0.16
IRX4P78413 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.04■□□□□ 0.16
IRX4P78413 AC024267.1-201ENST00000582320 895 ntBASIC16.04■□□□□ 0.16
IRX4P78413 AC008735.3-201ENST00000596646 500 ntBASIC16.04■□□□□ 0.16
IRX4P78413 BNIP3P29-201ENST00000598302 571 ntBASIC16.04■□□□□ 0.16
IRX4P78413 AC011447.5-201ENST00000616168 564 ntBASIC16.04■□□□□ 0.16
IRX4P78413 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms