Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEP78395 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEP78395 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.54■□□□□ 0.08
PRAMEP78395 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEP78395 AC025181.2-201ENST00000606994 802 ntBASIC15.54■□□□□ 0.08
PRAMEP78395 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEP78395 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEP78395 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEP78395 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PRAMEP78395 AC022144.1-201ENST00000602255 1580 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PRAMEP78395 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 C8orf49-201ENST00000525043 1968 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
PRAMEP78395 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 FAM8A3P-201ENST00000427218 844 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 BASP1P1-201ENST00000430708 665 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 AC135586.1-201ENST00000539323 574 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 AC092337.1-201ENST00000568699 1129 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 AC009407.1-201ENST00000568958 598 ntBASIC15.53■□□□□ 0.08
PRAMEP78395 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.53■□□□□ 0.08
PRAMEP78395 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.53■□□□□ 0.08
PRAMEP78395 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.53■□□□□ 0.08
PRAMEP78395 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.53■□□□□ 0.08
PRAMEP78395 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PRAMEP78395 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEP78395 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEP78395 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEP78395 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEP78395 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 WASH3P-207ENST00000560956 1394 ntBASIC15.52■□□□□ 0.08
PRAMEP78395 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEP78395 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PRAMEP78395 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PRAMEP78395 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms