Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 SLC22A20-204ENST00000530038 1673 ntBASIC13.35□□□□□ -0.27
UBA52P62987 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 AC004890.2-204ENST00000481968 304 ntBASIC13.35□□□□□ -0.27
UBA52P62987 AC027369.6-201ENST00000525520 931 ntBASIC13.35□□□□□ -0.27
UBA52P62987 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.35□□□□□ -0.27
UBA52P62987 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 AC107918.4-201ENST00000641966 3141 ntBASIC13.35□□□□□ -0.27
UBA52P62987 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.35□□□□□ -0.27
UBA52P62987 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 C18orf15-201ENST00000623680 2534 ntBASIC13.34□□□□□ -0.27
UBA52P62987 AC100757.3-201ENST00000622361 1406 ntBASIC13.34□□□□□ -0.27
UBA52P62987 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.34□□□□□ -0.27
UBA52P62987 PIN1P1-201ENST00000412108 996 ntBASIC13.34□□□□□ -0.27
UBA52P62987 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.34□□□□□ -0.27
UBA52P62987 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.34□□□□□ -0.27
UBA52P62987 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.34□□□□□ -0.27
UBA52P62987 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBA52P62987 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
UBA52P62987 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.34□□□□□ -0.27
UBA52P62987 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBA52P62987 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBA52P62987 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBA52P62987 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.33□□□□□ -0.27
UBA52P62987 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBA52P62987 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.33□□□□□ -0.27
UBA52P62987 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBA52P62987 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBA52P62987 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBA52P62987 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBA52P62987 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.33□□□□□ -0.28
UBA52P62987 AC090616.6-203ENST00000579186 1945 ntBASIC13.33□□□□□ -0.28
UBA52P62987 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBA52P62987 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBA52P62987 SNX33P1-201ENST00000592116 1762 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms