Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 AC018665.1-201ENST00000622927 1362 ntBASIC15.4■□□□□ 0.06
AP1S1P61966 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
AP1S1P61966 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S1P61966 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S1P61966 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S1P61966 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S1P61966 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.4■□□□□ 0.06
AP1S1P61966 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.4■□□□□ 0.06
AP1S1P61966 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.4■□□□□ 0.06
AP1S1P61966 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.4■□□□□ 0.06
AP1S1P61966 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 AL162274.1-201ENST00000617191 1098 ntBASIC15.4■□□□□ 0.06
AP1S1P61966 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.4■□□□□ 0.06
AP1S1P61966 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S1P61966 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S1P61966 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S1P61966 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 AC046158.3-201ENST00000624947 2558 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 REXO1L5P-201ENST00000622260 2098 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.39■□□□□ 0.05
AP1S1P61966 BCRP2-202ENST00000447763 634 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.39■□□□□ 0.05
AP1S1P61966 AC106760.1-201ENST00000508690 800 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 BCRP6-201ENST00000510112 632 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 BCRP7-201ENST00000511549 544 ntBASIC15.39■□□□□ 0.05
AP1S1P61966 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.39■□□□□ 0.05
AP1S1P61966 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
AP1S1P61966 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP1S1P61966 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S1P61966 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms