Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H6P61129 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC20.18■□□□□ 0.82
ZC3H6P61129 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.18■□□□□ 0.82
ZC3H6P61129 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H6P61129 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 AC005962.1-201ENST00000584100 773 ntBASIC20.18■□□□□ 0.82
ZC3H6P61129 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H6P61129 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZC3H6P61129 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H6P61129 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H6P61129 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 AC006449.5-201ENST00000610658 2098 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 RN7SKP230-201ENST00000365642 335 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H6P61129 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 FAM58BP-201ENST00000439056 645 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H6P61129 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H6P61129 AP001065.2-201ENST00000617205 644 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 AC051619.9-201ENST00000623237 597 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 CAP2P1-201ENST00000557743 1390 ntBASIC20.17■□□□□ 0.82
ZC3H6P61129 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H6P61129 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H6P61129 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H6P61129 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H6P61129 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H6P61129 AC024909.3-201ENST00000611513 2257 ntBASIC20.16■□□□□ 0.82
ZC3H6P61129 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H6P61129 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZC3H6P61129 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3H6P61129 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
ZC3H6P61129 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZC3H6P61129 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H6P61129 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3H6P61129 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms