Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.58□□□□□ -0.4
SPCS3P61009 IGHV3-62-201ENST00000520057 340 ntBASIC12.58□□□□□ -0.4
SPCS3P61009 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
SPCS3P61009 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.58□□□□□ -0.4
SPCS3P61009 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 AL607033.1-201ENST00000623900 1599 ntBASIC12.58□□□□□ -0.4
SPCS3P61009 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 ST20-AS1-201ENST00000560255 4223 ntBASIC12.58□□□□□ -0.4
SPCS3P61009 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SPCS3P61009 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.57□□□□□ -0.4
SPCS3P61009 AL591424.1-201ENST00000442569 1213 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 SPDYE11-202ENST00000450699 704 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.57□□□□□ -0.4
SPCS3P61009 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.57□□□□□ -0.4
SPCS3P61009 SPDYE9P-201ENST00000570642 692 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.57□□□□□ -0.4
SPCS3P61009 SPDYE10P-202ENST00000612005 668 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 SPDYE8P-202ENST00000612377 668 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 AC091812.2-201ENST00000619081 385 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.57□□□□□ -0.4
SPCS3P61009 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 AC092865.6-201ENST00000642101 219 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SPCS3P61009 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.57□□□□□ -0.4
SPCS3P61009 AC005912.2-201ENST00000619492 2400 ntBASIC12.57□□□□□ -0.4
SPCS3P61009 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPCS3P61009 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SPCS3P61009 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 ZNF259P1-201ENST00000407656 1365 ntBASIC12.56□□□□□ -0.4
SPCS3P61009 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms