Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.46■□□□□ 0.23
VCPP55072 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.46■□□□□ 0.23
VCPP55072 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.46■□□□□ 0.23
VCPP55072 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 TIMM17BP1-201ENST00000545713 516 ntBASIC16.46■□□□□ 0.23
VCPP55072 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.46■□□□□ 0.23
VCPP55072 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.46■□□□□ 0.23
VCPP55072 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.46■□□□□ 0.23
VCPP55072 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.46■□□□□ 0.23
VCPP55072 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VCPP55072 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
VCPP55072 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
VCPP55072 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VCPP55072 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 EEF1DP4-201ENST00000446006 880 ntBASIC16.45■□□□□ 0.22
VCPP55072 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.45■□□□□ 0.22
VCPP55072 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 AP000812.2-201ENST00000538934 718 ntBASIC16.45■□□□□ 0.22
VCPP55072 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 RN7SL560P-201ENST00000577943 264 ntBASIC16.45■□□□□ 0.22
VCPP55072 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.45■□□□□ 0.22
VCPP55072 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VCPP55072 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.45■□□□□ 0.22
VCPP55072 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.45■□□□□ 0.22
VCPP55072 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCPP55072 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.44■□□□□ 0.22
VCPP55072 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 C18orf15-201ENST00000623680 2534 ntBASIC16.44■□□□□ 0.22
VCPP55072 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
VCPP55072 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VCPP55072 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.44■□□□□ 0.22
VCPP55072 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.44■□□□□ 0.22
VCPP55072 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.44■□□□□ 0.22
VCPP55072 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.44■□□□□ 0.22
VCPP55072 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.44■□□□□ 0.22
VCPP55072 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCPP55072 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.44■□□□□ 0.22
VCPP55072 AC015967.2-201ENST00000624092 234 ntBASIC16.44■□□□□ 0.22
VCPP55072 AC006435.4-201ENST00000625037 234 ntBASIC16.44■□□□□ 0.22
VCPP55072 AL356737.1-201ENST00000634391 234 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms