Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 AL035633.1-201ENST00000406139 838 ntBASIC16.41■□□□□ 0.22
RAD23BP54727 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 AP005018.1-201ENST00000525475 301 ntBASIC16.41■□□□□ 0.22
RAD23BP54727 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 AC133539.2-201ENST00000604757 467 ntBASIC16.41■□□□□ 0.22
RAD23BP54727 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 KRT8P22-201ENST00000562317 1415 ntBASIC16.41■□□□□ 0.22
RAD23BP54727 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RAD23BP54727 MROH4P-201ENST00000431302 1578 ntBASIC16.41■□□□□ 0.22
RAD23BP54727 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAD23BP54727 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.41■□□□□ 0.22
RAD23BP54727 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAD23BP54727 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAD23BP54727 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.4■□□□□ 0.22
RAD23BP54727 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.4■□□□□ 0.22
RAD23BP54727 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.4■□□□□ 0.22
RAD23BP54727 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.4■□□□□ 0.22
RAD23BP54727 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.4■□□□□ 0.22
RAD23BP54727 SAMD11P1-201ENST00000571429 661 ntBASIC16.4■□□□□ 0.22
RAD23BP54727 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.4■□□□□ 0.22
RAD23BP54727 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 LINC02084-201ENST00000606069 1096 ntBASIC16.4■□□□□ 0.22
RAD23BP54727 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAD23BP54727 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 AC093525.8-201ENST00000624099 1342 ntBASIC16.4■□□□□ 0.22
RAD23BP54727 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD23BP54727 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD23BP54727 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.39■□□□□ 0.22
RAD23BP54727 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAD23BP54727 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 AC007787.1-201ENST00000588095 1583 ntBASIC16.39■□□□□ 0.21
RAD23BP54727 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAD23BP54727 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.39■□□□□ 0.21
RAD23BP54727 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAD23BP54727 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAD23BP54727 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
RAD23BP54727 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD23BP54727 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms