Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.87■□□□□ 0.29
PMS1P54277 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.87■□□□□ 0.29
PMS1P54277 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 AP001267.2-201ENST00000532619 2086 ntBASIC16.86■□□□□ 0.29
PMS1P54277 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PMS1P54277 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 GNAQP1-201ENST00000444815 1067 ntBASIC16.86■□□□□ 0.29
PMS1P54277 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.86■□□□□ 0.29
PMS1P54277 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.86■□□□□ 0.29
PMS1P54277 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.86■□□□□ 0.29
PMS1P54277 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.86■□□□□ 0.29
PMS1P54277 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.86■□□□□ 0.29
PMS1P54277 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.86■□□□□ 0.29
PMS1P54277 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.86■□□□□ 0.29
PMS1P54277 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.86■□□□□ 0.29
PMS1P54277 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.86■□□□□ 0.29
PMS1P54277 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
PMS1P54277 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PMS1P54277 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.85■□□□□ 0.29
PMS1P54277 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PMS1P54277 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PMS1P54277 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 HLA-K-203ENST00000430151 1046 ntBASIC16.85■□□□□ 0.29
PMS1P54277 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.85■□□□□ 0.29
PMS1P54277 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.85■□□□□ 0.29
PMS1P54277 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PMS1P54277 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.85■□□□□ 0.29
PMS1P54277 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.85■□□□□ 0.29
PMS1P54277 FAM86LP-201ENST00000478302 853 ntBASIC16.85■□□□□ 0.29
PMS1P54277 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 RARRES2P5-201ENST00000564013 466 ntBASIC16.85■□□□□ 0.29
PMS1P54277 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.85■□□□□ 0.29
PMS1P54277 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms