Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
PDX1P52945 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.89□□□□□ -0.03
PDX1P52945 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.89□□□□□ -0.03
PDX1P52945 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
PDX1P52945 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.89□□□□□ -0.03
PDX1P52945 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.89□□□□□ -0.03
PDX1P52945 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 AP005019.2-201ENST00000615104 511 ntBASIC14.89□□□□□ -0.03
PDX1P52945 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.89□□□□□ -0.03
PDX1P52945 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDX1P52945 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.89□□□□□ -0.03
PDX1P52945 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.88□□□□□ -0.03
PDX1P52945 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.88□□□□□ -0.03
PDX1P52945 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 AC023310.1-201ENST00000554836 735 ntBASIC14.88□□□□□ -0.03
PDX1P52945 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.88□□□□□ -0.03
PDX1P52945 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.88□□□□□ -0.03
PDX1P52945 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.88□□□□□ -0.03
PDX1P52945 AC145423.3-201ENST00000615987 467 ntBASIC14.88□□□□□ -0.03
PDX1P52945 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PDX1P52945 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PDX1P52945 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDX1P52945 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.87□□□□□ -0.03
PDX1P52945 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PDX1P52945 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms