Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 KRT8P44-201ENST00000441609 1350 ntBASIC16.89■□□□□ 0.29
GPC3P51654 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 AC138035.3-201ENST00000622706 2791 ntBASIC16.88■□□□□ 0.29
GPC3P51654 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 AL139094.1-201ENST00000405549 1188 ntBASIC16.88■□□□□ 0.29
GPC3P51654 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 YBX1P6-201ENST00000442962 1002 ntBASIC16.88■□□□□ 0.29
GPC3P51654 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC3P51654 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC3P51654 AL355994.2-201ENST00000447882 704 ntBASIC16.88■□□□□ 0.29
GPC3P51654 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.88■□□□□ 0.29
GPC3P51654 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 AC138951.2-201ENST00000623455 1161 ntBASIC16.88■□□□□ 0.29
GPC3P51654 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GPC3P51654 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GPC3P51654 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC3P51654 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.87■□□□□ 0.29
GPC3P51654 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
GPC3P51654 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC3P51654 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC3P51654 ACTBP11-201ENST00000436287 1126 ntBASIC16.87■□□□□ 0.29
GPC3P51654 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 AL590640.2-201ENST00000457038 527 ntBASIC16.87■□□□□ 0.29
GPC3P51654 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC3P51654 DUX4L45-201ENST00000566406 1057 ntBASIC16.87■□□□□ 0.29
GPC3P51654 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC3P51654 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.87■□□□□ 0.29
GPC3P51654 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.87■□□□□ 0.29
GPC3P51654 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.87■□□□□ 0.29
GPC3P51654 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC3P51654 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC3P51654 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC3P51654 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GPC3P51654 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC3P51654 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GPC3P51654 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC3P51654 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GPC3P51654 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GPC3P51654 AC126365.1-201ENST00000578585 1514 ntBASIC16.86■□□□□ 0.29
GPC3P51654 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GPC3P51654 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GPC3P51654 AC023157.3-201ENST00000619086 2088 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms