Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 MRPS18AP1-201ENST00000414458 589 ntBASIC15.3■□□□□ 0.04
SLC1A2P43004 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A2P43004 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 GAPDHP40-201ENST00000505218 1006 ntBASIC15.3■□□□□ 0.04
SLC1A2P43004 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A2P43004 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A2P43004 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A2P43004 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A2P43004 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A2P43004 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A2P43004 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 AC006538.3-201ENST00000612495 578 ntBASIC15.3■□□□□ 0.04
SLC1A2P43004 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A2P43004 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A2P43004 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A2P43004 PCDHA3-202ENST00000532566 4594 ntBASIC15.3■□□□□ 0.04
SLC1A2P43004 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A2P43004 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A2P43004 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A2P43004 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A2P43004 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A2P43004 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC007787.1-201ENST00000588095 1583 ntBASIC15.29■□□□□ 0.04
SLC1A2P43004 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A2P43004 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A2P43004 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 AL157414.3-201ENST00000624276 1954 ntBASIC15.29■□□□□ 0.04
SLC1A2P43004 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A2P43004 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A2P43004 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC1A2P43004 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A2P43004 LILRP1-201ENST00000444199 1370 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A2P43004 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC1A2P43004 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A2P43004 AL512638.1-201ENST00000457493 794 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 AC093214.1-201ENST00000511688 1107 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A2P43004 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A2P43004 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A2P43004 AC036164.1-201ENST00000570544 333 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 AC005498.2-205ENST00000593218 784 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A2P43004 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.28■□□□□ 0.04
SLC1A2P43004 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms