Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.13□□□□□ -0.31
CDKN1AP38936 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 AL118558.3-201ENST00000607414 1079 ntBASIC13.13□□□□□ -0.31
CDKN1AP38936 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.13□□□□□ -0.31
CDKN1AP38936 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CDKN1AP38936 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDKN1AP38936 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN1AP38936 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 AP002414.2-201ENST00000591780 3365 ntBASIC13.12□□□□□ -0.31
CDKN1AP38936 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDKN1AP38936 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDKN1AP38936 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.12□□□□□ -0.31
CDKN1AP38936 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 MIR4741-201ENST00000579822 90 ntBASIC13.12□□□□□ -0.31
CDKN1AP38936 MIR3615-201ENST00000581999 87 ntBASIC13.12□□□□□ -0.31
CDKN1AP38936 AC103810.3-201ENST00000583567 96 ntBASIC13.12□□□□□ -0.31
CDKN1AP38936 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.12□□□□□ -0.31
CDKN1AP38936 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.12□□□□□ -0.31
CDKN1AP38936 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 AC126177.1-201ENST00000547829 2218 ntBASIC13.12□□□□□ -0.31
CDKN1AP38936 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.12□□□□□ -0.31
CDKN1AP38936 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDKN1AP38936 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDKN1AP38936 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.11□□□□□ -0.31
CDKN1AP38936 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 RNU1-114P-201ENST00000365297 166 ntBASIC13.11□□□□□ -0.31
CDKN1AP38936 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 MIR1247-201ENST00000408206 136 ntBASIC13.11□□□□□ -0.31
CDKN1AP38936 MIR1202-201ENST00000408529 83 ntBASIC13.11□□□□□ -0.31
CDKN1AP38936 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDKN1AP38936 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDKN1AP38936 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.11□□□□□ -0.31
CDKN1AP38936 GAPDHP40-201ENST00000505218 1006 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms