Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.83□□□□□ -0.04
CAPN3P20807 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.83□□□□□ -0.04
CAPN3P20807 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.83□□□□□ -0.04
CAPN3P20807 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.83□□□□□ -0.04
CAPN3P20807 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CAPN3P20807 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.83□□□□□ -0.04
CAPN3P20807 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CAPN3P20807 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.82□□□□□ -0.04
CAPN3P20807 TARDBPP1-201ENST00000442013 1203 ntBASIC14.82□□□□□ -0.04
CAPN3P20807 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.82□□□□□ -0.04
CAPN3P20807 AC140878.1-201ENST00000565277 250 ntBASIC14.82□□□□□ -0.04
CAPN3P20807 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.82□□□□□ -0.04
CAPN3P20807 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.82□□□□□ -0.04
CAPN3P20807 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.82□□□□□ -0.04
CAPN3P20807 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN3P20807 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN3P20807 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN3P20807 AC015656.1-201ENST00000624209 3578 ntBASIC14.82□□□□□ -0.04
CAPN3P20807 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms