Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 IMP3P2-201ENST00000489760 475 ntBASIC16.66■□□□□ 0.26
HOXD8P13378 HLA-J-204ENST00000495278 958 ntBASIC16.66■□□□□ 0.26
HOXD8P13378 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXD8P13378 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXD8P13378 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HOXD8P13378 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXD8P13378 SNORD3B-2-202ENST00000571722 791 ntBASIC16.66■□□□□ 0.26
HOXD8P13378 RN7SL574P-201ENST00000581512 297 ntBASIC16.66■□□□□ 0.26
HOXD8P13378 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXD8P13378 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXD8P13378 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXD8P13378 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXD8P13378 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXD8P13378 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 AC023090.2-201ENST00000625182 2110 ntBASIC16.66■□□□□ 0.26
HOXD8P13378 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXD8P13378 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXD8P13378 AC006058.4-201ENST00000624016 1670 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 AC008132.1-202ENST00000342005 1389 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXD8P13378 C18orf15-201ENST00000623680 2534 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXD8P13378 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HOXD8P13378 ELK2AP-201ENST00000392510 1007 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXD8P13378 KLF2P1-201ENST00000447438 1042 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 RPL18P13-201ENST00000478088 569 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 AC125604.1-201ENST00000496255 707 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXD8P13378 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXD8P13378 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXD8P13378 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXD8P13378 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXD8P13378 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOXD8P13378 AC016629.1-201ENST00000596579 586 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.65■□□□□ 0.26
HOXD8P13378 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXD8P13378 AL132994.2-201ENST00000603120 687 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 AC090164.2-201ENST00000611487 516 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXD8P13378 CU633904.3-201ENST00000624042 1029 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXD8P13378 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXD8P13378 TMBIM7P-203ENST00000641617 1718 ntBASIC16.65■□□□□ 0.26
HOXD8P13378 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXD8P13378 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HOXD8P13378 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.64■□□□□ 0.26
HOXD8P13378 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXD8P13378 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXD8P13378 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXD8P13378 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXD8P13378 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.64■□□□□ 0.25
HOXD8P13378 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 ACTG1P2-201ENST00000415776 1125 ntBASIC16.64■□□□□ 0.25
HOXD8P13378 ACTG1P11-201ENST00000425411 1125 ntBASIC16.64■□□□□ 0.25
HOXD8P13378 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXD8P13378 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXD8P13378 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXD8P13378 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.64■□□□□ 0.25
HOXD8P13378 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXD8P13378 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXD8P13378 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms