Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 SOCS2P1-201ENST00000417727 557 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ACTG1P3-201ENST00000431775 1114 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 SLED1-202ENST00000512051 380 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC104989.1-201ENST00000519711 778 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TDH-203ENST00000531764 1110 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC233724.13-201ENST00000598383 410 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AL022328.1-201ENST00000610050 478 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCNYL3P0C7X3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AC006518.1-201ENST00000541449 943 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 RN7SL440P-201ENST00000577855 343 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AL391069.4-201ENST00000609583 481 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AC107308.1-201ENST00000615897 301 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AC134407.2-201ENST00000625089 1978 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCNYL3P0C7X3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 AL009178.2-201ENST00000597278 2719 ntBASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCNYL3P0C7X3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms