Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 AL133267.1-201ENST00000398220 340 ntBASIC13.66□□□□□ -0.22
APOC1P02654 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 CNN2P2-201ENST00000443536 909 ntBASIC13.66□□□□□ -0.22
APOC1P02654 CNN2P3-201ENST00000450201 906 ntBASIC13.66□□□□□ -0.22
APOC1P02654 HLA-V-204ENST00000476601 1289 ntBASIC13.66□□□□□ -0.22
APOC1P02654 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.66□□□□□ -0.22
APOC1P02654 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.66□□□□□ -0.22
APOC1P02654 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.66□□□□□ -0.22
APOC1P02654 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.66□□□□□ -0.22
APOC1P02654 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 AL136317.3-201ENST00000618497 906 ntBASIC13.66□□□□□ -0.22
APOC1P02654 AL033527.5-202ENST00000641632 1098 ntBASIC13.66□□□□□ -0.22
APOC1P02654 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 WASH3P-207ENST00000560956 1394 ntBASIC13.66□□□□□ -0.22
APOC1P02654 FO538757.1-201ENST00000623083 1397 ntBASIC13.66□□□□□ -0.22
APOC1P02654 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 AC084364.1-201ENST00000551967 1556 ntBASIC13.66□□□□□ -0.22
APOC1P02654 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOC1P02654 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 Z97205.2-201ENST00000564697 1639 ntBASIC13.65□□□□□ -0.22
APOC1P02654 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 AC004967.1-201ENST00000453589 447 ntBASIC13.65□□□□□ -0.22
APOC1P02654 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.65□□□□□ -0.22
APOC1P02654 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 AC025678.2-201ENST00000562061 970 ntBASIC13.65□□□□□ -0.22
APOC1P02654 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.65□□□□□ -0.22
APOC1P02654 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 LINC00628-201ENST00000628516 1289 ntBASIC13.65□□□□□ -0.22
APOC1P02654 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
APOC1P02654 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC1P02654 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 AC009090.5-201ENST00000624886 2285 ntBASIC13.65□□□□□ -0.22
APOC1P02654 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC1P02654 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC1P02654 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
APOC1P02654 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.64□□□□□ -0.23
APOC1P02654 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms