Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.24■□□□□ 0.19
ZBED1O96006 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 TCAF2P1-201ENST00000291129 2421 ntBASIC16.24■□□□□ 0.19
ZBED1O96006 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.24■□□□□ 0.19
ZBED1O96006 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZBED1O96006 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
ZBED1O96006 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
ZBED1O96006 AC005034.1-201ENST00000426657 489 ntBASIC16.24■□□□□ 0.19
ZBED1O96006 RN7SL837P-201ENST00000463010 287 ntBASIC16.24■□□□□ 0.19
ZBED1O96006 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ZBED1O96006 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.24■□□□□ 0.19
ZBED1O96006 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.24■□□□□ 0.19
ZBED1O96006 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.24■□□□□ 0.19
ZBED1O96006 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.24■□□□□ 0.19
ZBED1O96006 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
ZBED1O96006 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZBED1O96006 MYO15B-237ENST00000642007 4893 ntBASIC16.24■□□□□ 0.19
ZBED1O96006 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.24■□□□□ 0.19
ZBED1O96006 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZBED1O96006 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.24■□□□□ 0.19
ZBED1O96006 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZBED1O96006 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
ZBED1O96006 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.23■□□□□ 0.19
ZBED1O96006 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZBED1O96006 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 AL512384.1-201ENST00000406683 331 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 KRT17P7-201ENST00000451704 1104 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.23■□□□□ 0.19
ZBED1O96006 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.23■□□□□ 0.19
ZBED1O96006 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.23■□□□□ 0.19
ZBED1O96006 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
ZBED1O96006 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.23■□□□□ 0.19
ZBED1O96006 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ZBED1O96006 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 AL035252.4-201ENST00000624174 288 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 AL645728.2-202ENST00000641679 227 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 AL138799.1-201ENST00000448213 1675 ntBASIC16.23■□□□□ 0.19
ZBED1O96006 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZBED1O96006 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.23■□□□□ 0.19
ZBED1O96006 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZBED1O96006 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 AC063926.2-201ENST00000623766 1308 ntBASIC16.22■□□□□ 0.19
ZBED1O96006 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZBED1O96006 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.22■□□□□ 0.19
ZBED1O96006 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZBED1O96006 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.22■□□□□ 0.19
ZBED1O96006 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.22■□□□□ 0.19
ZBED1O96006 AC132938.2-201ENST00000579188 680 ntBASIC16.22■□□□□ 0.19
ZBED1O96006 AL591163.1-201ENST00000641757 987 ntBASIC16.22■□□□□ 0.19
ZBED1O96006 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZBED1O96006 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 AC099063.4-201ENST00000641099 1602 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms