Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 AC138035.3-201ENST00000622706 2791 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 OR2K2-202ENST00000374428 1038 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.77■■□□□ 1.08
POLR1AO95602 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC21.77■■□□□ 1.08
POLR1AO95602 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 AL031713.1-201ENST00000564813 661 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 MIR6842-201ENST00000612539 65 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
POLR1AO95602 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
POLR1AO95602 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
POLR1AO95602 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.07
POLR1AO95602 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR1AO95602 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 AC023024.2-201ENST00000623561 1993 ntBASIC21.76■■□□□ 1.07
POLR1AO95602 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
POLR1AO95602 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.76■■□□□ 1.07
POLR1AO95602 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.76■■□□□ 1.07
POLR1AO95602 VDAC1P1-201ENST00000439229 848 ntBASIC21.76■■□□□ 1.07
POLR1AO95602 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.76■■□□□ 1.07
POLR1AO95602 AC004466.1-201ENST00000599515 1080 ntBASIC21.76■■□□□ 1.07
POLR1AO95602 AC007718.1-201ENST00000621078 280 ntBASIC21.76■■□□□ 1.07
POLR1AO95602 CICP6-201ENST00000457191 2729 ntBASIC21.76■■□□□ 1.07
POLR1AO95602 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
POLR1AO95602 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 STRN-202ENST00000379213 2254 ntTSL 5 BASIC21.76■■□□□ 1.07
POLR1AO95602 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
POLR1AO95602 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1AO95602 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
POLR1AO95602 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR1AO95602 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1AO95602 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR1AO95602 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC026410.1-201ENST00000507366 1101 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
POLR1AO95602 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
POLR1AO95602 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1AO95602 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 AL008718.2-201ENST00000609206 1313 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1AO95602 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1AO95602 KRT8P21-201ENST00000430398 1491 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1AO95602 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
POLR1AO95602 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 PAUPAR-201ENST00000630360 2965 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 AC079328.2-201ENST00000561241 3354 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR1AO95602 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.75■■□□□ 1.07
POLR1AO95602 AC005618.3-201ENST00000624928 458 ntBASIC21.75■■□□□ 1.07
POLR1AO95602 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR1AO95602 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR1AO95602 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR1AO95602 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1AO95602 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1AO95602 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1AO95602 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1AO95602 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
POLR1AO95602 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
POLR1AO95602 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms