| CLDN9 | O95484 | ATP6V0E1-203 | ENST00000519374 | 1433 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | DYSF-201 | ENST00000258104 | 6796 nt | APPRIS P3 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | DYSF-204 | ENST00000409582 | 6790 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | DYSF-210 | ENST00000413539 | 6769 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | LIMS2-205 | ENST00000409455 | 2500 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CLN3-201 | ENST00000333496 | 1608 nt | TSL 5 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | STRN3-201 | ENST00000355683 | 3970 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | GMNN-201 | ENST00000230056 | 1262 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AL096814.1-202 | ENST00000372963 | 647 nt | APPRIS P5 TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PNMT-202 | ENST00000394246 | 821 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AL161638.1-201 | ENST00000420354 | 481 nt | TSL 3 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ARHGAP11B-201 | ENST00000428041 | 1017 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC007364.1-201 | ENST00000449714 | 1022 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RPS27L-204 | ENST00000455271 | 923 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AL512638.1-201 | ENST00000457493 | 794 nt | BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC004890.2-204 | ENST00000481968 | 304 nt | BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC113383.1-201 | ENST00000514696 | 582 nt | TSL 4 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | LINC01605-204 | ENST00000522718 | 1093 nt | TSL 3 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | GABARAPL1-217 | ENST00000545887 | 571 nt | APPRIS P1 TSL 3 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC012615.6-204 | ENST00000587741 | 477 nt | TSL 3 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | INO80C-210 | ENST00000590757 | 595 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC008738.7-201 | ENST00000609744 | 511 nt | BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | GRIA3-205 | ENST00000611689 | 936 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | TM4SF19-AS1-203 | ENST00000452051 | 1829 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RALGAPA1-203 | ENST00000389698 | 7864 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | QRICH1-202 | ENST00000395443 | 3549 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | DHODH-201 | ENST00000219240 | 2426 nt | APPRIS P2 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PITPNM2-202 | ENST00000320201 | 6736 nt | APPRIS P3 TSL 5 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | SPIRE1-201 | ENST00000309836 | 1877 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | C6orf120-201 | ENST00000332290 | 2667 nt | APPRIS P1 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RNFT2-203 | ENST00000392549 | 2896 nt | APPRIS P1 TSL 5 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ACRBP-201 | ENST00000229243 | 1933 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | BRAP-201 | ENST00000327551 | 1947 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KLC4-204 | ENST00000453940 | 1945 nt | TSL 2 BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ZNF32-AS3-201 | ENST00000458063 | 1932 nt | TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PXYLP1-201 | ENST00000286353 | 3281 nt | APPRIS P1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC007686.3-201 | ENST00000619017 | 3487 nt | BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RTKN-202 | ENST00000272430 | 2142 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.86 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PRPF38B-202 | ENST00000370022 | 1591 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ALAS2-201 | ENST00000330807 | 2027 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CIART-203 | ENST00000369095 | 1433 nt | APPRIS P3 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CNOT9-208 | ENST00000542068 | 3259 nt | APPRIS P1 TSL 5 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | SLCO4C1-201 | ENST00000310954 | 5334 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | WDR25-204 | ENST00000554175 | 2055 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AFAP1-201 | ENST00000358461 | 7516 nt | APPRIS P3 TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | FARS2-202 | ENST00000324331 | 1692 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ANKRD44-203 | ENST00000409153 | 2724 nt | TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | NFATC4-206 | ENST00000539237 | 5686 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KRT9-202 | ENST00000588431 | 1493 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CBX2-201 | ENST00000269399 | 1061 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | FOXB1-201 | ENST00000396057 | 2957 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | SUN1-204 | ENST00000403868 | 978 nt | TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | EFHD1-202 | ENST00000409613 | 1156 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | LINC01067-201 | ENST00000432575 | 664 nt | TSL 3 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KCNQ1DN-201 | ENST00000441418 | 1093 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC004066.1-201 | ENST00000502488 | 802 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | STOM-203 | ENST00000538954 | 1257 nt | TSL 5 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC010491.1-203 | ENST00000564167 | 638 nt | TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC093512.1-201 | ENST00000617969 | 520 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC004840.1-201 | ENST00000636359 | 365 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KSR1-216 | ENST00000582410 | 2392 nt | TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | MANBAL-204 | ENST00000397151 | 1503 nt | APPRIS P1 TSL 3 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | MANBAL-205 | ENST00000397152 | 1539 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | GFRA2-204 | ENST00000518077 | 1503 nt | TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ZFP41-203 | ENST00000520584 | 3284 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | SDK1-210 | ENST00000615806 | 10258 nt | APPRIS ALT2 TSL 5 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ACSS2-202 | ENST00000360596 | 3065 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | MYADML2-201 | ENST00000409745 | 2452 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | FAM149B1-201 | ENST00000242505 | 5408 nt | APPRIS P1 TSL 5 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CROT-201 | ENST00000331536 | 3175 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PAK2-201 | ENST00000327134 | 6139 nt | APPRIS P1 TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC068946.1-202 | ENST00000318673 | 2745 nt | APPRIS P1 TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CICP14-201 | ENST00000629111 | 2732 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ITSN1-212 | ENST00000399367 | 5722 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | STYXL1-203 | ENST00000359697 | 1374 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | PGC-202 | ENST00000373025 | 1371 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | FECH-202 | ENST00000382873 | 2526 nt | APPRIS ALT2 TSL 2 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | TRPV4-201 | ENST00000261740 | 3233 nt | APPRIS P1 TSL 1 (best) BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | SOWAHA-201 | ENST00000378693 | 3211 nt | APPRIS P1 BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC232323.1-201 | ENST00000540724 | 2099 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | REXO1L5P-201 | ENST00000622260 | 2098 nt | BASIC | 14.85 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AC010327.3-201 | ENST00000591665 | 1643 nt | TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | FAN1-207 | ENST00000565466 | 2304 nt | TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AP4E1-201 | ENST00000261842 | 6758 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RPH3AL-201 | ENST00000323434 | 2809 nt | TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | GLIS2-201 | ENST00000262366 | 4469 nt | APPRIS P1 TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | TSEN2-201 | ENST00000284995 | 2381 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CCDC183-AS1-201 | ENST00000414656 | 2386 nt | TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | AFF3-203 | ENST00000409579 | 4342 nt | APPRIS P3 TSL 5 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | MAEL-202 | ENST00000367872 | 1908 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RALGPS2-204 | ENST00000367635 | 5834 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KCNT1-211 | ENST00000491806 | 3678 nt | APPRIS ALT2 TSL 5 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CLK3P2-201 | ENST00000427566 | 1453 nt | BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | UVSSA-208 | ENST00000511563 | 1494 nt | APPRIS ALT2 TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | CD209-207 | ENST00000593660 | 1497 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | TAF6-201 | ENST00000344095 | 2727 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | KMT2E-201 | ENST00000257745 | 6714 nt | APPRIS P1 TSL 1 (best) BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | ZFR2-201 | ENST00000262961 | 4756 nt | APPRIS P1 TSL 5 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | TMEM201-202 | ENST00000340381 | 3776 nt | APPRIS P1 TSL 5 BASIC | 14.84 | □□□□□ -0.03 | | |
| CLDN9 | O95484 | RGS3-201 | ENST00000317613 | 2542 nt | TSL 2 BASIC | 14.84 | □□□□□ -0.03 | | |