Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALX3O95076 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALX3O95076 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ALX3O95076 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ALX3O95076 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 KRT8P37-201ENST00000451609 1420 ntBASIC13.68□□□□□ -0.22
ALX3O95076 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 HLA-H-201ENST00000383620 1096 ntBASIC13.68□□□□□ -0.22
ALX3O95076 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.68□□□□□ -0.22
ALX3O95076 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.68□□□□□ -0.22
ALX3O95076 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.68□□□□□ -0.22
ALX3O95076 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 AC026979.3-201ENST00000607315 403 ntBASIC13.68□□□□□ -0.22
ALX3O95076 AC027601.4-201ENST00000611259 610 ntBASIC13.68□□□□□ -0.22
ALX3O95076 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 AC092865.6-201ENST00000642101 219 ntBASIC13.68□□□□□ -0.22
ALX3O95076 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
ALX3O95076 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 KRT8P44-201ENST00000441609 1350 ntBASIC13.68□□□□□ -0.22
ALX3O95076 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ALX3O95076 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.68□□□□□ -0.22
ALX3O95076 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ALX3O95076 CICP16-201ENST00000502609 2813 ntBASIC13.68□□□□□ -0.22
ALX3O95076 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 AC092127.1-201ENST00000567093 3455 ntBASIC13.67□□□□□ -0.22
ALX3O95076 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
ALX3O95076 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 AC127383.1-201ENST00000444697 1800 ntBASIC13.67□□□□□ -0.22
ALX3O95076 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ALX3O95076 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.67□□□□□ -0.22
ALX3O95076 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ALX3O95076 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 KRT18P3-201ENST00000451602 1288 ntBASIC13.67□□□□□ -0.22
ALX3O95076 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 RNA5SP410-201ENST00000516285 106 ntBASIC13.67□□□□□ -0.22
ALX3O95076 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.67□□□□□ -0.22
ALX3O95076 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.67□□□□□ -0.22
ALX3O95076 LINC01225-203ENST00000563550 1244 ntBASIC13.67□□□□□ -0.22
ALX3O95076 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.67□□□□□ -0.22
ALX3O95076 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.67□□□□□ -0.22
ALX3O95076 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ALX3O95076 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms