Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.8■□□□□ 0.44
CTNND1O60716 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 CYP46A4P-201ENST00000414953 267 ntBASIC17.8■□□□□ 0.44
CTNND1O60716 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 RN7SL769P-201ENST00000469386 295 ntBASIC17.8■□□□□ 0.44
CTNND1O60716 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.8■□□□□ 0.44
CTNND1O60716 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.8■□□□□ 0.44
CTNND1O60716 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTNND1O60716 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTNND1O60716 REXO1L5P-201ENST00000622260 2098 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 KRT8P29-201ENST00000420409 1371 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.79■□□□□ 0.44
CTNND1O60716 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 TUBBP5-203ENST00000508529 1334 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 AC010491.1-201ENST00000563101 2797 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 MIR769-201ENST00000390225 118 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.79■□□□□ 0.44
CTNND1O60716 AC016629.1-201ENST00000596579 586 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 AC022748.3-201ENST00000621828 275 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.79■□□□□ 0.44
CTNND1O60716 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 AP000593.2-201ENST00000542775 1433 ntBASIC17.79■□□□□ 0.44
CTNND1O60716 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTNND1O60716 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.79■□□□□ 0.44
CTNND1O60716 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.78■□□□□ 0.44
CTNND1O60716 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CTNND1O60716 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 AC132872.4-202ENST00000622924 2756 ntBASIC17.78■□□□□ 0.44
CTNND1O60716 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.78■□□□□ 0.44
CTNND1O60716 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.78■□□□□ 0.44
CTNND1O60716 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 AC026434.2-201ENST00000506094 1078 ntBASIC17.78■□□□□ 0.44
CTNND1O60716 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.78■□□□□ 0.44
CTNND1O60716 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.78■□□□□ 0.44
CTNND1O60716 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.78■□□□□ 0.44
CTNND1O60716 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.78■□□□□ 0.44
CTNND1O60716 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms