Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 MIR326-201ENST00000362220 95 ntBASIC15.24■□□□□ 0.03
PCDHGA12O60330 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AC112504.1-201ENST00000623415 1841 ntBASIC15.24■□□□□ 0.03
PCDHGA12O60330 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PRAL-201ENST00000624952 3286 ntBASIC15.23■□□□□ 0.03
PCDHGA12O60330 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 AP002414.2-201ENST00000591780 3365 ntBASIC15.23■□□□□ 0.03
PCDHGA12O60330 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 AP001582.1-201ENST00000525856 295 ntBASIC15.23■□□□□ 0.03
PCDHGA12O60330 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 AC099063.4-201ENST00000641099 1602 ntBASIC15.23■□□□□ 0.03
PCDHGA12O60330 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA12O60330 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA12O60330 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 CALR4P-201ENST00000431943 946 ntBASIC15.22■□□□□ 0.03
PCDHGA12O60330 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms