Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.31■□□□□ 0.04
LDB2O43679 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.31■□□□□ 0.04
LDB2O43679 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.31■□□□□ 0.04
LDB2O43679 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.31■□□□□ 0.04
LDB2O43679 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 SPDYE22P-201ENST00000582158 798 ntBASIC15.31■□□□□ 0.04
LDB2O43679 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.31■□□□□ 0.04
LDB2O43679 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LDB2O43679 AC105233.6-201ENST00000642093 218 ntBASIC15.31■□□□□ 0.04
LDB2O43679 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LDB2O43679 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LDB2O43679 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.31■□□□□ 0.04
LDB2O43679 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LDB2O43679 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 AC106881.1-201ENST00000605849 3329 ntBASIC15.3■□□□□ 0.04
LDB2O43679 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LDB2O43679 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LDB2O43679 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.3■□□□□ 0.04
LDB2O43679 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.3■□□□□ 0.04
LDB2O43679 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.3■□□□□ 0.04
LDB2O43679 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.3■□□□□ 0.04
LDB2O43679 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.3■□□□□ 0.04
LDB2O43679 WASH4P-201ENST00000564273 1246 ntBASIC15.3■□□□□ 0.04
LDB2O43679 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDB2O43679 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 AC140912.1-201ENST00000577171 1054 ntBASIC15.3■□□□□ 0.04
LDB2O43679 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LDB2O43679 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.3■□□□□ 0.04
LDB2O43679 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
LDB2O43679 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LDB2O43679 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms