Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.6■□□□□ 0.09
RIPK2O43353 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 MST1P2-201ENST00000457982 2291 ntBASIC15.6■□□□□ 0.09
RIPK2O43353 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
RIPK2O43353 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.6■□□□□ 0.09
RIPK2O43353 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RIPK2O43353 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.6■□□□□ 0.09
RIPK2O43353 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RIPK2O43353 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.6■□□□□ 0.09
RIPK2O43353 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RIPK2O43353 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
RIPK2O43353 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.6■□□□□ 0.09
RIPK2O43353 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RIPK2O43353 AL365209.1-201ENST00000624418 6473 ntBASIC15.6■□□□□ 0.09
RIPK2O43353 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RIPK2O43353 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RIPK2O43353 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 AC005252.3-201ENST00000623855 2258 ntBASIC15.59■□□□□ 0.09
RIPK2O43353 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RIPK2O43353 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RIPK2O43353 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 KRT18P64-201ENST00000434946 1219 ntBASIC15.59■□□□□ 0.09
RIPK2O43353 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 TIMM8BP1-201ENST00000452384 211 ntBASIC15.59■□□□□ 0.09
RIPK2O43353 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.59■□□□□ 0.09
RIPK2O43353 AC009078.2-202ENST00000463353 338 ntBASIC15.59■□□□□ 0.09
RIPK2O43353 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.59■□□□□ 0.09
RIPK2O43353 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.59■□□□□ 0.09
RIPK2O43353 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.59■□□□□ 0.09
RIPK2O43353 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.59■□□□□ 0.09
RIPK2O43353 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RIPK2O43353 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RIPK2O43353 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
RIPK2O43353 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RIPK2O43353 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RIPK2O43353 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RIPK2O43353 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms