Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NDUFA1O15239 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.56□□□□□ -0.72
NDUFA1O15239 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.56□□□□□ -0.72
NDUFA1O15239 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NDUFA1O15239 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NDUFA1O15239 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 RPL13AP23-201ENST00000480739 586 ntBASIC10.55□□□□□ -0.72
NDUFA1O15239 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.55□□□□□ -0.72
NDUFA1O15239 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AL450472.2-201ENST00000603663 1156 ntBASIC10.55□□□□□ -0.72
NDUFA1O15239 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 MTHFR-210ENST00000641407 2387 ntBASIC10.55□□□□□ -0.72
NDUFA1O15239 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC092053.3-201ENST00000641308 4975 ntBASIC10.55□□□□□ -0.72
NDUFA1O15239 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.55□□□□□ -0.72
NDUFA1O15239 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NDUFA1O15239 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
NDUFA1O15239 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.55□□□□□ -0.72
NDUFA1O15239 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
NDUFA1O15239 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NDUFA1O15239 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NDUFA1O15239 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.54□□□□□ -0.72
NDUFA1O15239 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NDUFA1O15239 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
NDUFA1O15239 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms