Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRAMEF25A6NGN4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 MEP1AP4-201ENST00000423244 1087 ntBASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC055876.2-201ENST00000531834 546 ntBASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRAMEF25A6NGN4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 TOMM22P5-201ENST00000416399 439 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 DFFBP1-201ENST00000433250 979 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AC023310.3-201ENST00000557027 670 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AC100756.1-201ENST00000562736 682 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AC138749.3-201ENST00000567691 622 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AC116165.1-201ENST00000611806 668 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 AL158212.4-201ENST00000624062 1286 ntBASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.39□□□□□ -0.11
PRAMEF25A6NGN4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms