Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 AC104794.3-201ENST00000566840 1248 ntBASIC17.51■□□□□ 0.39
CLIC4Q9Y696 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 AC018442.1-201ENST00000421439 2061 ntBASIC17.51■□□□□ 0.39
CLIC4Q9Y696 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC4Q9Y696 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AL360270.3-201ENST00000609118 1348 ntBASIC17.5■□□□□ 0.39
CLIC4Q9Y696 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AC097359.2-201ENST00000604992 2389 ntBASIC17.5■□□□□ 0.39
CLIC4Q9Y696 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.5■□□□□ 0.39
CLIC4Q9Y696 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC4Q9Y696 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC007787.1-201ENST00000588095 1583 ntBASIC17.49■□□□□ 0.39
CLIC4Q9Y696 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.49■□□□□ 0.39
CLIC4Q9Y696 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC023310.3-201ENST00000557027 670 ntBASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC100756.1-201ENST00000562736 682 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms