Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC078819.1-201ENST00000547454 765 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC012085.1-201ENST00000548270 765 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ENPP7P14-201ENST00000621765 1040 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC138951.2-201ENST00000623455 1161 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC132872.4-202ENST00000622924 2756 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AL157414.3-201ENST00000624276 1954 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MROH4P-201ENST00000431302 1578 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MST1L-201ENST00000442552 2185 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 CD8B2-202ENST00000417670 633 ntBASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 HLA-V-201ENST00000429037 534 ntBASIC16.15■□□□□ 0.18
CDH9Q9ULB4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH9Q9ULB4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
CDH9Q9ULB4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH9Q9ULB4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 WASH3P-207ENST00000560956 1394 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC055811.4-201ENST00000624039 1754 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC026954.1-201ENST00000429771 1293 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC245100.3-201ENST00000441281 285 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 BNIP3P42-201ENST00000454982 569 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms