Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 AC013726.1-201ENST00000563747 2285 ntBASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC180Q9P1Z9 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 AC092580.1-201ENST00000433998 658 ntBASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 PEBP1P2-201ENST00000603980 558 ntBASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC180Q9P1Z9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PYY2-201ENST00000315776 282 ntBASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PPIA-208ENST00000489459 907 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PPIA-210ENST00000620047 827 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 AP000845.1-201ENST00000581677 2131 ntBASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 AC009093.10-201ENST00000641956 1442 ntBASIC30.17■■■□□ 2.42
CCDC180Q9P1Z9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 RN7SL357P-201ENST00000581065 298 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 AC055811.3-201ENST00000584952 686 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 AC010976.2-201ENST00000609697 852 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 PKD1P6-201ENST00000343738 4769 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A21P-201ENST00000510875 1396 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A15P-201ENST00000514465 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A6P-201ENST00000515148 1394 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A16P-201ENST00000526662 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A9P-201ENST00000527940 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A5P-201ENST00000528738 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A14P-201ENST00000530386 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 FAM90A13P-201ENST00000534703 1395 ntBASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC180Q9P1Z9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 AC093826.1-201ENST00000508655 993 ntBASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 USB1-205ENST00000561743 1135 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC180Q9P1Z9 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 AC108734.2-201ENST00000420887 1069 ntBASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 AC018695.6-201ENST00000614011 534 ntBASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC180Q9P1Z9 KRT17P5-201ENST00000332088 839 ntBASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.41
CCDC180Q9P1Z9 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC30.14■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms