Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AC079328.1-201ENST00000560358 952 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 MIR4683-201ENST00000579659 81 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 RN7SL163P-201ENST00000583100 276 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 BNIP3P13-201ENST00000599968 566 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 CU633904.3-201ENST00000624042 1029 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AC004923.1-202ENST00000642106 209 ntBASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC10Q9NYD6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXC10Q9NYD6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AC090616.6-203ENST00000579186 1945 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RN7SKP175-201ENST00000408472 289 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AL133466.1-201ENST00000447582 150 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RN7SL774P-201ENST00000577467 290 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RN7SL190P-201ENST00000582519 257 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AL358472.3-201ENST00000608147 415 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AL136301.1-201ENST00000615830 422 ntBASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC10Q9NYD6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 SPTLC1P5-201ENST00000450718 252 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RNMTL1P1-201ENST00000454103 560 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AC106794.1-201ENST00000506935 792 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AC022217.1-201ENST00000521069 738 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 CHMP4BP1-201ENST00000556017 588 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AC105129.2-201ENST00000559536 390 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 AC002472.3-201ENST00000640124 621 ntBASIC17.38■□□□□ 0.37
HOXC10Q9NYD6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms