Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRMT13Q9NUP7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRMT13Q9NUP7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 INE2-201ENST00000630399 1874 ntBASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AC007274.2-201ENST00000421675 662 ntBASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 AP000593.2-201ENST00000542775 1433 ntBASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRMT13Q9NUP7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 TUBB8P8-201ENST00000458717 1058 ntBASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AL353726.2-201ENST00000623259 884 ntBASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AC068587.8-201ENST00000641239 219 ntBASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRMT13Q9NUP7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AC009093.2-202ENST00000620513 2079 ntBASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms