Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 AL358472.5-202ENST00000641448 1267 ntBASIC16.34■□□□□ 0.21
CISHQ9NSE2 AC105233.6-201ENST00000642093 218 ntBASIC16.34■□□□□ 0.21
CISHQ9NSE2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
CISHQ9NSE2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 ACE3P-201ENST00000423435 1973 ntBASIC16.33■□□□□ 0.21
CISHQ9NSE2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.33■□□□□ 0.21
CISHQ9NSE2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CISHQ9NSE2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 RNU1-114P-201ENST00000365297 166 ntBASIC16.33■□□□□ 0.2
CISHQ9NSE2 ACKR1-201ENST00000368121 1240 ntBASIC16.33■□□□□ 0.2
CISHQ9NSE2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 RN7SL837P-201ENST00000463010 287 ntBASIC16.33■□□□□ 0.2
CISHQ9NSE2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AC010319.3-201ENST00000597028 470 ntBASIC16.33■□□□□ 0.2
CISHQ9NSE2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.33■□□□□ 0.2
CISHQ9NSE2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CISHQ9NSE2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CISHQ9NSE2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 AL139094.1-201ENST00000405549 1188 ntBASIC16.32■□□□□ 0.2
CISHQ9NSE2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CISHQ9NSE2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.32■□□□□ 0.2
CISHQ9NSE2 AC093433.1-201ENST00000458048 571 ntBASIC16.32■□□□□ 0.2
CISHQ9NSE2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms