Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RNA5SP415-201ENST00000517246 115 ntBASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AC243562.2-201ENST00000561247 970 ntBASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AL691432.3-201ENST00000621860 400 ntBASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AC116407.3-201ENST00000623905 1129 ntBASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AL118506.1-201ENST00000601296 3082 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AC092127.1-201ENST00000567093 3455 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 GPX1P2-201ENST00000429271 606 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AC079776.4-201ENST00000511039 504 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 RN7SL510P-201ENST00000581311 263 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 AL031008.1-201ENST00000619963 541 ntBASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C12orf4Q9NQ89 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
C12orf4Q9NQ89 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms