Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 NUS1P3-201ENST00000423502 862 ntBASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AC005730.2-201ENST00000564549 1184 ntBASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 MIR4741-201ENST00000579822 90 ntBASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AC104306.2-201ENST00000451877 341 ntBASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KIAA1549Q9HCM3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KIAA1549Q9HCM3 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms