Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 FAM207CP-201ENST00000443486 507 ntBASIC15.34■□□□□ 0.05
MRM3Q9HC36 AC093004.1-201ENST00000508850 424 ntBASIC15.34■□□□□ 0.05
MRM3Q9HC36 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 GRK6P1-201ENST00000400595 1711 ntBASIC15.34■□□□□ 0.05
MRM3Q9HC36 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRM3Q9HC36 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.34■□□□□ 0.05
MRM3Q9HC36 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.33■□□□□ 0.05
MRM3Q9HC36 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
MRM3Q9HC36 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
MRM3Q9HC36 AL009178.2-201ENST00000597278 2719 ntBASIC15.33■□□□□ 0.05
MRM3Q9HC36 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRM3Q9HC36 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AC018442.1-201ENST00000421439 2061 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 SPDYE19P-201ENST00000338590 713 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 NUS1P3-201ENST00000423502 862 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 HLA-K-203ENST00000430151 1046 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 VDAC1P7-201ENST00000462417 847 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AC007191.1-201ENST00000623179 2995 ntBASIC15.33■□□□□ 0.04
MRM3Q9HC36 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRM3Q9HC36 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MRM3Q9HC36 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 AL158070.2-201ENST00000623713 1621 ntBASIC15.32■□□□□ 0.04
MRM3Q9HC36 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 TERF1P3-201ENST00000505638 1227 ntBASIC15.32■□□□□ 0.04
MRM3Q9HC36 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 AC055876.2-201ENST00000531834 546 ntBASIC15.32■□□□□ 0.04
MRM3Q9HC36 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms