Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AC239800.4-201ENST00000603712 296 ntBASIC18.05■□□□□ 0.48
RNF41Q9H4P4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AL162274.1-201ENST00000617191 1098 ntBASIC18.05■□□□□ 0.48
RNF41Q9H4P4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 AC046158.3-201ENST00000624947 2558 ntBASIC18.05■□□□□ 0.48
RNF41Q9H4P4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF41Q9H4P4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AC018665.1-201ENST00000622927 1362 ntBASIC18.04■□□□□ 0.48
RNF41Q9H4P4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AC063926.3-201ENST00000624734 5658 ntBASIC18.04■□□□□ 0.48
RNF41Q9H4P4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 REXO1L5P-201ENST00000622260 2098 ntBASIC18.04■□□□□ 0.48
RNF41Q9H4P4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF41Q9H4P4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms