Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 FAM8A4P-201ENST00000435433 1213 ntBASIC16.47■□□□□ 0.23
NXF3Q9H4D5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 OR10B1P-201ENST00000601666 907 ntBASIC16.47■□□□□ 0.23
NXF3Q9H4D5 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 AC091271.1-201ENST00000611877 1162 ntBASIC16.47■□□□□ 0.23
NXF3Q9H4D5 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.47■□□□□ 0.23
NXF3Q9H4D5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NXF3Q9H4D5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AC023024.2-201ENST00000623561 1993 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AC007969.1-201ENST00000433675 447 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 HOMER2P2-201ENST00000451621 847 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AL391280.1-201ENST00000506969 1062 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 EEF1DP1-201ENST00000585891 896 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AL603764.1-201ENST00000636452 321 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 AC012508.2-201ENST00000567613 1472 ntBASIC16.46■□□□□ 0.23
NXF3Q9H4D5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NXF3Q9H4D5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NXF3Q9H4D5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.46■□□□□ 0.22
NXF3Q9H4D5 CLUHP2-201ENST00000426660 1303 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 PFN1P12-201ENST00000455938 534 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms