Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHRDL1Q9BU40 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AL133215.2-201ENST00000609242 977 ntBASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 AC079781.5-202ENST00000641784 3743 ntBASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHRDL1Q9BU40 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 AC015656.1-201ENST00000624209 3578 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 MIR1233-2-201ENST00000408138 82 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 MIR1233-1-201ENST00000408722 82 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 SPDYE7P-202ENST00000420373 878 ntBASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHRDL1Q9BU40 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms