Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 AL360270.3-201ENST00000609118 1348 ntBASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDK5RAP1Q96SZ6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDK5RAP1Q96SZ6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 TPM3P8-201ENST00000330554 643 ntBASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 AC023824.1-201ENST00000562945 2975 ntBASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.89■□□□□ 0.13
CDK5RAP1Q96SZ6 KRT8P44-201ENST00000441609 1350 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 CICP11-201ENST00000434745 2827 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ANKRD19P-201ENST00000338192 862 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC119751.2-201ENST00000504529 210 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC023310.1-201ENST00000554836 735 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC244669.2-201ENST00000612320 853 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms