Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 AC008825.2-201ENST00000603374 718 ntBASIC16.23■□□□□ 0.19
ALPK3Q96L96 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
ALPK3Q96L96 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALPK3Q96L96 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 AC006449.5-201ENST00000610658 2098 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 CICP12-201ENST00000455801 843 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 ABHD17AP9-201ENST00000561925 548 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 AC090510.3-201ENST00000615831 821 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ALPK3Q96L96 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 AC003102.2-201ENST00000589195 1469 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 MTHFR-217ENST00000641820 1569 ntBASIC16.22■□□□□ 0.19
ALPK3Q96L96 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALPK3Q96L96 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AC026470.1-201ENST00000478038 846 ntBASIC16.21■□□□□ 0.19
ALPK3Q96L96 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 MIR5001-201ENST00000580185 100 ntBASIC16.21■□□□□ 0.19
ALPK3Q96L96 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AP005264.6-204ENST00000588436 719 ntBASIC16.21■□□□□ 0.19
ALPK3Q96L96 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 AC021016.3-201ENST00000608367 477 ntBASIC16.21■□□□□ 0.19
ALPK3Q96L96 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALPK3Q96L96 TRMT112P3-201ENST00000580149 358 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms