Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 AC018529.2-202ENST00000611482 3087 ntBASIC14.83□□□□□ -0.04
VPS33AQ96AX1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS33AQ96AX1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 TARDBPP1-201ENST00000442013 1203 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ACTG1P14-201ENST00000446382 1122 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ALG1L5P-201ENST00000482043 771 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PGAM5P1-201ENST00000518923 814 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC055717.3-201ENST00000622967 595 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AL137784.3-201ENST00000623858 2288 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 AC005840.4-201ENST00000541242 2494 ntBASIC14.82□□□□□ -0.04
VPS33AQ96AX1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS33AQ96AX1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 AL122018.1-201ENST00000446607 2310 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 FO393414.2-201ENST00000405153 598 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 GHSR-202ENST00000427970 912 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 ALG1L8P-201ENST00000533887 760 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 AC040169.1-201ENST00000565382 521 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 C20orf181-201ENST00000623918 480 ntBASIC14.81□□□□□ -0.04
VPS33AQ96AX1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms