Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2E3Q969T4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 LINC01101-201ENST00000622953 1884 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL391825.1-201ENST00000457671 1364 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AC103702.1-201ENST00000548801 2630 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL365209.1-201ENST00000624418 6473 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL645937.2-201ENST00000396808 931 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 DFFBP1-201ENST00000433250 979 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AC026410.3-201ENST00000514280 936 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL049840.4-201ENST00000602422 811 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AC093813.1-201ENST00000605066 256 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 AL596257.1-201ENST00000641463 2694 ntBASIC14.78□□□□□ -0.04
UBE2E3Q969T4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2E3Q969T4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 DRD5P1-201ENST00000456605 1438 ntBASIC14.77□□□□□ -0.04
UBE2E3Q969T4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.77□□□□□ -0.04
UBE2E3Q969T4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.77□□□□□ -0.04
UBE2E3Q969T4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.77□□□□□ -0.04
UBE2E3Q969T4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2E3Q969T4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 AC087499.6-201ENST00000411576 835 ntBASIC14.77□□□□□ -0.05
UBE2E3Q969T4 NUS1P3-201ENST00000423502 862 ntBASIC14.77□□□□□ -0.05
UBE2E3Q969T4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 FAM207CP-201ENST00000443486 507 ntBASIC14.77□□□□□ -0.05
UBE2E3Q969T4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.77□□□□□ -0.05
UBE2E3Q969T4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms