Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 TDH-203ENST00000531764 1110 ntBASIC16.24■□□□□ 0.19
ATP2A3Q93084 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AL049840.4-201ENST00000602422 811 ntBASIC16.24■□□□□ 0.19
ATP2A3Q93084 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 AL022328.1-201ENST00000610050 478 ntBASIC16.24■□□□□ 0.19
ATP2A3Q93084 MIR6775-201ENST00000617557 69 ntBASIC16.24■□□□□ 0.19
ATP2A3Q93084 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 AC119751.2-201ENST00000504529 210 ntBASIC16.23■□□□□ 0.19
ATP2A3Q93084 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 PTP4A1P2-201ENST00000546033 454 ntBASIC16.23■□□□□ 0.19
ATP2A3Q93084 SNX29P1-201ENST00000548357 1007 ntBASIC16.23■□□□□ 0.19
ATP2A3Q93084 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 AP002414.2-201ENST00000591780 3365 ntBASIC16.23■□□□□ 0.19
ATP2A3Q93084 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A3Q93084 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATP2A3Q93084 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AC018892.3-201ENST00000623986 2499 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 AC023157.3-201ENST00000619086 2088 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AC120045.2-201ENST00000567334 178 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 AC124283.3-201ENST00000570869 594 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 MIR4259-201ENST00000584466 101 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms